To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("OTUbase")

In most cases, you don't need to download the package archive at all.

OTUbase

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see OTUbase.

Provides structure and functions for the analysis of OTU data

Bioconductor version: 2.8

Provides a platform for Operational Taxonomic Unit based analysis

Author: Daniel Beck, Matt Settles, and James A. Foster

Maintainer: Daniel Beck <danlbek at gmail.com>

Citation (from within R, enter citation("OTUbase")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("OTUbase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("OTUbase")

PDF		Introduction_to_OTUbase.pdf
PDF		Reference Manual

biocViews	Bioinformatics, DataImport, HighThroughputSequencingData, Software
Version	1.2.0
In Bioconductor since	BioC 2.7 (R-2.12) (5.5 years)
License	Artistic-2.0
Depends	R (>= 2.9.0), methods, ShortRead(>= 1.4.0), Biobase, vegan
Imports	Biostrings, ShortRead, IRanges
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	mcaGUI
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	OTUbase_1.2.0.tar.gz
Windows Binary	OTUbase_1.2.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/OTUbase/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/OTUbase/
Package Downloads Report	Download Stats

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