To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")

In most cases, you don't need to download the package archive at all.

geneplotter

   

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see geneplotter.

Graphics related functions for Bioconductor

Bioconductor version: 2.8

Some basic functions for plotting genetic data

Author: R. Gentleman, Biocore

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

Citation (from within R, enter citation("geneplotter")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("geneplotter")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneplotter")

 

PDF byChroms.pdf
PDF visualize.pdf
PDF   Reference Manual

Details

biocViews Software, Visualization
Version 1.30.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License Artistic-2.0
Depends Biobase(>= 2.5.5), annotate, lattice
Imports annotate, AnnotationDbi, Biobase(>= 2.5.5), graphics, grDevices, grid, methods, RColorBrewer, stats, utils
LinkingTo
Suggests Biobase(>= 2.5.5), Rgraphviz, annotate, fibroEset, hgu95av2.db, hu6800.db, hgu133a.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me biocGraph, DESeq, flowQ, IsoGeneGUI, RNAinteract, RNAither
Suggests Me AgiMicroRna, BiocCaseStudies, biocGraph, Category, maDB
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source geneplotter_1.30.0.tar.gz
Windows Binary geneplotter_1.30.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/geneplotter/tree/release-2.8
Package Short Url http://bioconductor.org/packages/geneplotter/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations:

Fred Hutchinson Cancer Research Center