To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("apComplex")

In most cases, you don't need to download the package archive at all.

apComplex

   

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see apComplex.

Estimate protein complex membership using AP-MS protein data

Bioconductor version: 2.8

Functions to estimate a bipartite graph of protein complex membership using AP-MS data.

Author: Denise Scholtens <dscholtens at northwestern.edu>

Maintainer: Denise Scholtens <dscholtens at northwestern.edu>

Citation (from within R, enter citation("apComplex")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("apComplex")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("apComplex")

 

PDF apComplex.pdf
PDF   Reference Manual

Details

biocViews GraphsAndNetworks, MassSpectrometry, Software, Visualization
Version 2.18.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 11 years)
License LGPL
Depends graph, RBGL
Imports Rgraphviz, stats, org.Sc.sgd.db
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me ScISI, simulatorAPMS
Imports Me
Suggests Me BiocCaseStudies
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source apComplex_2.18.0.tar.gz
Windows Binary apComplex_2.18.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/apComplex/tree/release-2.8
Package Short Url http://bioconductor.org/packages/apComplex/
Package Downloads Report Download Stats

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