To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

In most cases, you don't need to download the package archive at all.

RCytoscape

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see RCytoscape.

Display and manipulate graphs in Cytoscape

Bioconductor version: 2.8

Interactvive viewing and exploration of graphs, connecting R to Cytoscape.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

Citation (from within R, enter citation("RCytoscape")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RCytoscape")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCytoscape")

PDF		RCytoscape.pdf
PDF		Reference Manual

biocViews	GraphsAndNetworks, Software
Version	1.2.1
In Bioconductor since	BioC 2.7 (R-2.12) (5.5 years)
License	GPL-2
Depends	R (>= 2.12.1), graph(>= 1.28.0), XMLRPC (>= 0.2.4)
Imports	methods, XMLRPC
LinkingTo
Suggests	RUnit
SystemRequirements
Enhances
URL	http://rcytoscape.systemsbiology.net/versions/current/
Depends On Me
Imports Me	NCIgraph
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	RCytoscape_1.2.1.tar.gz
Windows Binary	RCytoscape_1.2.1.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/RCytoscape/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/RCytoscape/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: