To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GGBase")

In most cases, you don't need to download the package archive at all.

GGBase

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see GGBase.

infrastructure for genetics of gene expression (c) 2008 VJ Carey

Bioconductor version: 2.8

infrastructure for dealing with hapmap SNP reports, GWAS, etc.

Author: Vince Carey <stvjc at channing.harvard.edu>

Maintainer: Vince Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("GGBase")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("GGBase")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GGBase")

biocViews	Bioinformatics, GeneticVariability, Genetics, SNP, Software
Version	3.12.0
In Bioconductor since	BioC 2.2 (R-2.7) (8 years)
License	Artistic-2.0
Depends	R (>= 2.7.0), methods, Biobase(>= 2.9.0), snpStats(>= 1.1.10), RSQLite
Imports	AnnotationDbi
LinkingTo
Suggests	illuminaHumanv1.db, SNPlocs.Hsapiens.dbSNP.20090506
SystemRequirements
Enhances
URL
Depends On Me	ceu1kg, ceuhm3, encoDnaseI, GGdata, GGtools, hmyriB36
Imports Me
Suggests Me	ind1KG
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	GGBase_3.12.0.tar.gz
Windows Binary	GGBase_3.12.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/GGBase/tree/release-2.8
Package Short Url	http://bioconductor.org/packages/GGBase/
Package Downloads Report	Download Stats

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