To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("pathRender")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.14
build graphs from pathway databases, render them by Rgraphviz
Author: Li Long <lilong at isb-sib.ch>
Maintainer: Li Long <lilong at isb-sib.ch>
Citation (from within R,
enter citation("pathRender")
):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("pathRender")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pathRender")
R Script | pathRender overview | |
R Script | pathway graphs colored by expression map | |
Reference Manual | ||
Text | NEWS |
biocViews | GraphAndNetwork, Pathways, Software, Visualization |
Version | 1.32.0 |
In Bioconductor since | BioC 1.8 (R-2.3) |
License | LGPL |
Depends | graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods |
Imports | |
Suggests | ALL, hgu95av2.db |
System Requirements | |
URL | http://www.bioconductor.org |
Depends On Me | |
Imports Me | |
Suggests Me |
Follow Installation instructions to use this package in your R session.
Package Source | pathRender_1.32.0.tar.gz |
Windows Binary | pathRender_1.32.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | pathRender_1.32.0.tgz |
Mac OS X 10.9 (Mavericks) | pathRender_1.32.0.tgz |
Browse/checkout source | (username/password: readonly) |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!