To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("COPDSexualDimorphism")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.14
Sexual dimoprhic and COPD differential (SDCD) analysis contrasts regression coefficients from two stratified analysis. Stratification can be done in two ways: by COPD status or by sex. For COPD-stratified analysis, SDCD analysis contrasts sexual dimorphism between cases and controls, while sex-stratified SDCD analsysis contrasts COPD differential expression pattern between males and females. The package is meant to be used in conjunction with the package limma.
Author: J Fah Sathirapongsasuti
Maintainer: J Fah Sathirapongsasuti <fah at cs.stanford.edu>
Citation (from within R,
enter citation("COPDSexualDimorphism")
):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("COPDSexualDimorphism")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("COPDSexualDimorphism")
R Script | SDCD eQTL | |
R Script | SDCD Genes | |
R Script | SDCD Methylation | |
Reference Manual | ||
Text | NEWS |
biocViews | AssayDomain, DNAMethylation, DifferentialExpression, GeneExpression, Microarray, Software |
Version | 1.0.0 |
In Bioconductor since | BioC 2.14 (R-3.1) |
License | LGPL-2.1 |
Depends | COPDSexualDimorphism.data, NCBI2R, RColorBrewer, beeswarm, limma, GenomicRanges, gplots, gtools |
Imports | |
Suggests | |
System Requirements | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me |
Follow Installation instructions to use this package in your R session.
Package Source | COPDSexualDimorphism_1.0.0.tar.gz |
Windows Binary | COPDSexualDimorphism_1.0.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | COPDSexualDimorphism_1.0.0.tgz |
Mac OS X 10.9 (Mavericks) | COPDSexualDimorphism_1.0.0.tgz |
Browse/checkout source | (username/password: readonly) |
Package Downloads Report | Download Stats |
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