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biocLite("AllelicImbalance")

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AllelicImbalance

Investigates allele specific expression

Bioconductor version: 2.14

Provides a framework for allelic specific expression investigation using RNA-seq data

Author: Jesper R Gadin, Lasse Folkersen

Maintainer: Jesper R Gadin <j.r.gadin at gmail.com>

Citation (from within R, enter citation("AllelicImbalance")):

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("AllelicImbalance")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AllelicImbalance")

biocViews	AI, ASE, Allelic Imbalance, Genetics, Infrastructure, Sequencing, Software
Version	1.2.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	GenomicAlignments, GenomicRanges, R (>= 3.0.0)
Imports	methods, BiocGenerics, IRanges, Biostrings, Rsamtools, GenomicFeatures, AnnotationDbi
Suggests	RUnit, org.Hs.eg.db, TxDb.Hsapiens.UCSC.hg19.knownGene, SNPlocs.Hsapiens.dbSNP.20120608
System Requirements
URL	https://github.com/pappewaio/AllelicImbalance
Depends On Me
Imports Me
Suggests Me

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