source("http://bioconductor.org/biocLite.R")
biocLite("mitoODEdata")

mitoODEdata

Experimental data associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted).

Bioconductor version: 2.13

This package contains the experimental data (assay annotation, siRNA annotation, time-lapse cell counts) associated to the paper "Dynamical modelling of phenotypes in a genome-wide RNAi live-cell imaging assay" (submitted). The data ultimately come from the Mitocheck assay reported in "Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes" (Neumann, Walter et al, Nature 2010).

Author: Gregoire Pau

Maintainer: Gregoire Pau <pau.gregoire at gene.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("mitoODEdata")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mitoODEdata")

 

PDF	R Script	Mitoode data
PDF		Reference Manual
Text		NEWS

Details

biocViews	CellBasedAssays, ExperimentData, Preprocessing, TimeCourse
Version	0.99.6
License	LGPL
Depends	R (>= 2.14.0)
Imports
Suggests
System Requirements
URL
Depends On Me	mitoODE
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	mitoODEdata_0.99.6.tar.gz
Windows Binary	mitoODEdata_0.99.6.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	mitoODEdata_0.99.6.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats