To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm8")

In most cases, you don't need to download the package archive at all.

BSgenome.Mmusculus.UCSC.mm8

Mus musculus (Mouse) full genome (UCSC version mm8)

Bioconductor version: 2.13

Mus musculus (Mouse) full genome as provided by UCSC (mm8, Feb. 2006) and stored in Biostrings objects.

Author: H. Pages

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

Citation (from within R, enter citation("BSgenome.Mmusculus.UCSC.mm8")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Mmusculus.UCSC.mm8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BSgenome.Mmusculus.UCSC.mm8")

 

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Mus_musculus
Version 1.3.17
License Artistic-2.0
Depends BSgenome(>= 1.19.2)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me rTRM

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Mmusculus.UCSC.mm8_1.3.17.tar.gz
Windows Binary BSgenome.Mmusculus.UCSC.mm8_1.3.17.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Mmusculus.UCSC.mm8_1.3.17.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center