source("http://bioconductor.org/biocLite.R")
biocLite("plier")

plier

Implements the Affymetrix PLIER algorithm

Bioconductor version: 2.13

The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.

Author: Affymetrix Inc., Crispin J Miller, PICR

Maintainer: Crispin Miller <cmiller at picr.man.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plier")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plier")

 

PDF		Reference Manual
Text		README

Details

biocViews	Software
Version	1.32.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	GPL (>= 2)
Depends	R (>= 2.0), methods
Imports	affy, Biobase, methods
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	piano, virtualArray

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	plier_1.32.0.tar.gz
Windows Binary	plier_1.32.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	plier_1.32.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats