source("http://bioconductor.org/biocLite.R")
biocLite("plethy")

plethy

R framework for exploration and analysis of respirometry data

Bioconductor version: 2.13

This package provides the infrastructure and tools to import, query and perform basic analysis of whole body plethysmography and metabolism data. Currently support is limited to data derived from Buxco respirometry instruments as exported by their FinePointe software.

Author: Daniel Bottomly, Marty Ferris

Maintainer: Daniel Bottomly <bottomly at ohsu.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("plethy")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("plethy")

 

PDF	R Script	plethy
PDF		Reference Manual
Text		NEWS

Details

biocViews	DataImport, DataRepresentation, Infastructure, Software, TimeCourse, biocViews
Version	1.0.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	R (>= 3.0.0)
Imports	Streamer, DBI, RSQLite, methods, IRanges, reshape2, batch
Suggests	RUnit, BiocGenerics
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	plethy_1.0.0.tar.gz
Windows Binary	plethy_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	plethy_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats