source("http://bioconductor.org/biocLite.R")
biocLite("keggorthology")

keggorthology

graph support for KO, KEGG Orthology

Bioconductor version: 2.13

graphical representation of the Feb 2010 KEGG Orthology. The KEGG orthology is a set of pathway IDs that are not to be confused with the KEGG ortholog IDs.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("keggorthology")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("keggorthology")

 

PDF	R Script	keggorthology overview
PDF		Reference Manual

Details

biocViews	GraphsAndNetworks, NetworkVisualization, Pathways, Software
Version	2.14.0
In Bioconductor since	BioC 2.6 (R-2.11)
License	Artistic-2.0
Depends	R (>= 2.5.0), stats, graph, hgu95av2.db
Imports	AnnotationDbi, graph, DBI, graph, grDevices, methods, stats, tools, utils
Suggests	RBGL, ALL
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	MLInterfaces

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	keggorthology_2.14.0.tar.gz
Windows Binary	keggorthology_2.14.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	keggorthology_2.14.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats