source("http://bioconductor.org/biocLite.R")
biocLite("arrayQuality")

arrayQuality

Assessing array quality on spotted arrays

Bioconductor version: 2.13

Functions for performing print-run and array level quality assessment.

Author: Agnes Paquet and Jean Yee Hwa Yang <yeehwa at stat.berkeley.edu>

Maintainer: Agnes Paquet <paquetagnes at yahoo.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("arrayQuality")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("arrayQuality")

 

HTML		arrayQuality User Manual
HTML		arrayQuality User's guide
HTML		customQuality
HTML		print-run qc
PDF		Reference Manual

Details

biocViews	Microarray, QualityControl, Software, TwoChannel, Visualization
Version	1.40.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	LGPL
Depends	R (>= 2.2.0)
Imports	graphics, grDevices, grid, gridBase, hexbin, limma, marray, methods, RColorBrewer, stats, utils
Suggests	mclust, MEEBOdata, HEEBOdata
System Requirements
URL	http://arrays.ucsf.edu/
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	arrayQuality_1.40.0.tar.gz
Windows Binary	arrayQuality_1.40.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	arrayQuality_1.40.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats