source("http://bioconductor.org/biocLite.R")
biocLite("XDE")

XDE

XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression

Bioconductor version: 2.13

Multi-level model for cross-study detection of differential gene expression.

Author: R.B. Scharpf, G. Parmigiani, A.B. Nobel, and H. Tjelmeland

Maintainer: Robert Scharpf <rscharpf at jhsph.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("XDE")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("XDE")

 

PDF	R Script	XDE Vignette
PDF	R Script	XdeParameterClass Vignette
PDF		Reference Manual
Text		NEWS

Details

biocViews	Bioinformatics, DifferentialExpression, Microarray, Software
Version	2.8.0
In Bioconductor since	BioC 2.2 (R-2.7)
License	LGPL-2
Depends	R (>= 2.10.0), Biobase(>= 2.5.5), methods, graphics
Imports	Biobase, BiocGenerics, genefilter, graphics, grDevices, gtools, MergeMaid, methods, stats, utils, mvtnorm
Suggests	siggenes, genefilter, MASS, RColorBrewer, GeneMeta, RUnit
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	XDE_2.8.0.tar.gz
Windows Binary	XDE_2.8.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	XDE_2.8.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats