To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TFBSTools")

In most cases, you don't need to download the package archive at all.

TFBSTools

Software package for TFBS

Bioconductor version: 2.13

Software package for TFBS.

Author: Ge Tan <ge.tan09 at imperial.ac.uk>

Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>

Citation (from within R, enter citation("TFBSTools")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("TFBSTools")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TFBSTools")

 

PDF R Script TFBSTools
PDF   Reference Manual

Details

biocViews GeneRegulation, MotifAnnotation, MotifDiscovery, Software
Version 1.0.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL-2
Depends R (>= 3.0.1), methods, IRanges(>= 1.19.38)
Imports Biostrings(>= 2.29.19), RSQLite (>= 0.11.4), seqLogo
Suggests
System Requirements
URL http://jaspardev.genereg.net/
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TFBSTools_1.0.0.tar.gz
Windows Binary TFBSTools_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) TFBSTools_1.0.0.tgz
Browse/checkout source (username/password: readonly)
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