Software package for TFBS


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Documentation for package ‘TFBSTools’ version 1.0.0

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bg Class '"XMatrixList"'
bg-method '"XMatrix"' objects
bg-method Class '"XMatrixList"'
bg<--method '"XMatrix"' objects
deleteMatrixHavingID JASPAR database operations
deleteMatrixHavingID-method JASPAR database operations
getMatrixByID Basic JASPAR database search functionis 'getMatrixByID', 'getMatrixByName'
getMatrixByID-method Basic JASPAR database search functionis 'getMatrixByID', 'getMatrixByName'
getMatrixByName Basic JASPAR database search functionis 'getMatrixByID', 'getMatrixByName'
getMatrixByName-method Basic JASPAR database search functionis 'getMatrixByID', 'getMatrixByName'
getMatrixSet Advanced JASPAR database search functions 'get_MatrixSet'
getMatrixSet-method Advanced JASPAR database search functions 'get_MatrixSet'
ID Class '"XMatrixList"'
ID-method '"XMatrix"' objects
ID-method Class '"XMatrixList"'
ID<--method '"XMatrix"' objects
initializeJASPARDB JASPAR database operations
initializeJASPARDB-method JASPAR database operations
length-method '"XMatrix"' objects
length-methods '"XMatrix"' objects
Matrix Class '"XMatrixList"'
Matrix-method '"XMatrix"' objects
Matrix-method Class '"XMatrixList"'
Matrix<--method '"XMatrix"' objects
matrixClass Class '"XMatrixList"'
matrixClass-method '"XMatrix"' objects
matrixClass-method Class '"XMatrixList"'
matrixClass<--method '"XMatrix"' objects
matrixType Class '"XMatrixList"'
matrixType-method '"XMatrix"' objects
matrixType-method Class '"XMatrixList"'
matrixType-methods '"XMatrix"' objects
name Class '"XMatrixList"'
name-method '"XMatrix"' objects
name-method Class '"XMatrixList"'
name<--method '"XMatrix"' objects
PFMatrix '"XMatrix"' objects
PFMatrix-class '"XMatrix"' objects
PFMatrixList Class '"XMatrixList"'
PFMatrixList-class Class '"XMatrixList"'
reverseComplement-method '"XMatrix"' objects
storeMatrix JASPAR database operations
storeMatrix-method JASPAR database operations
storeMatrix-methods JASPAR database operations
strand Class '"XMatrixList"'
strand-method '"XMatrix"' objects
strand-method Class '"XMatrixList"'
strand<--method '"XMatrix"' objects
tags '"XMatrix"' objects
tags-method '"XMatrix"' objects
tags-method Class '"XMatrixList"'
TFBSTools TFBS software package.
XMatrix '"XMatrix"' objects
XMatrix-class '"XMatrix"' objects
XMatrixList Class '"XMatrixList"'
XMatrixList-method Class '"XMatrixList"'
[-method '"XMatrix"' objects
[-methods '"XMatrix"' objects