source("http://bioconductor.org/biocLite.R")
biocLite("RNAither")

RNAither

Statistical analysis of high-throughput RNAi screens

Bioconductor version: 2.13

RNAither analyzes cell-based RNAi screens, and includes quality assessment, customizable normalization and statistical tests, leading to lists of significant genes and biological processes.

Author: Nora Rieber and Lars Kaderali, University of Heidelberg, Viroquant Research Group Modeling, Im Neuenheimer Feld 267, 69120 Heidelberg, Germany

Maintainer: Nora Rieber <RNAither at gmx.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RNAither")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAither")

 

PDF	R Script	RNAither, an automated pipeline for the statistical analysis of high-throughput RNAi screens
PDF		Reference Manual

Details

biocViews	Annotation, Bioinformatics, CellBasedAssays, GO, Preprocessing, QualityControl, Software, Visualization
Version	2.10.0
In Bioconductor since	BioC 2.3 (R-2.8)
License	Artistic-2.0
Depends	R (>= 2.10), topGO, RankProd, prada
Imports	geneplotter, limma, biomaRt, car, splots, methods
Suggests
System Requirements
URL
Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	RNAither_2.10.0.tar.gz
Windows Binary	RNAither_2.10.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	RNAither_2.10.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats