source("http://bioconductor.org/biocLite.R")
biocLite("PGSEA")

PGSEA

Parametric Gene Set Enrichment Analysis

Bioconductor version: 2.13

Parametric Analysis of Gene Set Enrichment

Author: Kyle Furge <kyle.furge at vai.org> and Karl Dykema <karl.dykema at vai.org>

Maintainer: Karl Dykema <karl.dykema at vai.org>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("PGSEA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PGSEA")

 

PDF	R Script	HOWTO: PGSEA
PDF	R Script	HOWTO: PGSEA Example Workflow
PDF		Reference Manual

Details

biocViews	Microarray, Software
Version	1.36.0
In Bioconductor since	BioC 2.0 (R-2.5)
License	GPL-2
Depends	R (>= 2.10), GO.db, KEGG.db, AnnotationDbi, annaffy, methods, Biobase(>= 2.5.5)
Imports
Suggests	GSEABase, GEOquery, org.Hs.eg.db, hgu95av2.db, limma
System Requirements
URL
Depends On Me	GeneExpressionSignature
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	PGSEA_1.36.0.tar.gz
Windows Binary	PGSEA_1.36.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	PGSEA_1.36.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats