source("http://bioconductor.org/biocLite.R")
biocLite("Clonality")

Clonality

Clonality testing

Bioconductor version: 2.13

Statistical tests for clonality versus independence of tumors from the same patient based on their LOH or genomewide copy number profiles

Author: Irina Ostrovnaya

Maintainer: Irina Ostrovnaya <ostrovni at mskcc.org>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Clonality")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Clonality")

 

PDF	R Script	Clonality
PDF		Reference Manual

Details

biocViews	Classification, CopyNumberVariants, Microarray, Software, aCGH
Version	1.10.1
In Bioconductor since	BioC 2.8 (R-2.13)
License	GPL-3
Depends	R (>= 2.12.2), DNAcopy
Imports	DNAcopy, grDevices, graphics, stats, utils
Suggests	gdata, DNAcopy
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Clonality_1.10.1.tar.gz
Windows Binary	Clonality_1.10.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	Clonality_1.10.1.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats