msdata

Various Mass Spectrometry raw data example files

Bioconductor version: Release (2.12)

Ion Trap positive ionization mode data in mzData file format. Subset from 500-850 m/z and 1190-1310 seconds, incl. MS2 and MS3, intensity threshold 100.000. Extracts from FTICR Apex III, m/z 400-450. Subset of UPLC - Bruker micrOTOFq data, both mzData and mzML.

Author: Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("msdata")

To cite this package in a publication, start R and enter:

    citation("msdata")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, MassSpectrometryData
Version 0.1.13
License GPL (>= 2)
Depends
Imports
Suggests xcms
System Requirements
URL
Depends On Me
Imports Me
Suggests Me mzR, RforProteomics, xcms

Package Downloads

Package Source msdata_0.1.13.tar.gz
Windows Binary msdata_0.1.13.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) msdata_0.1.13.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center