Bioconductor version: Release (2.12)
This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.
Author: Rafael A. Irizarry <rafa at jhu.edu>, Laurent Gautier <laurent at cbs.dtu.dk>, Wolfgang Huber <w.huber at dkfz-heidelberg.de>, Ben Bolstad <bmb at bmbolstad.com>
Maintainer: James W. MacDonald <jmacdon at med.umich.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("makecdfenv")
To cite this package in a publication, start R and enter:
citation("makecdfenv")
R Script | makecdfenv primer | |
Reference Manual |
biocViews | DataImport, OneChannel, Preprocessing, Software |
Version | 1.36.0 |
In Bioconductor since | BioC 1.6 (R-1.11) or earlier |
License | GPL (>= 2) |
Depends | R (>= 2.6.0), methods, affyio |
Imports | Biobase, affy, methods, stats, utils, zlibbioc |
Suggests | |
System Requirements | |
URL | |
Depends On Me | altcdfenvs |
Imports Me | |
Suggests Me |
Package Source | makecdfenv_1.36.0.tar.gz |
Windows Binary | makecdfenv_1.36.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | makecdfenv_1.36.0.tgz |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!