mBPCR
Bayesian Piecewise Constant Regression for DNA copy number estimation
Bioconductor version: Release (2.12)
Estimates the DNA copy number profile using mBPCR to detect regions with copy number changes
Author: P.M.V. Rancoita <paola.rancoita at gmail.com>, with contributions from M. Hutter <marcus.hutter at anu.edu.au>
Maintainer: P.M.V. Rancoita <paola.rancoita at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("mBPCR")
To cite this package in a publication, start R and enter:
citation("mBPCR")
Documentation
| R Script | mBPCR | |
| Reference Manual |
Details
| biocViews | Bioinformatics, CopyNumberVariants, Microarray, SNP, Software, aCGH |
| Version | 1.14.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) |
| License | GPL (>= 2) |
| Depends | oligoClasses, SNPchip |
| Imports | Biobase |
| Suggests | xtable |
| System Requirements | |
| URL | http://www.idsia.ch/~paola/mBPCR |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | mBPCR_1.14.0.tar.gz |
| Windows Binary | mBPCR_1.14.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | mBPCR_1.14.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2013
