XDE
XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression
Bioconductor version: Release (2.12)
Multi-level model for cross-study detection of differential gene expression.
Author: R.B. Scharpf, G. Parmigiani, A.B. Nobel, and H. Tjelmeland
Maintainer: Robert Scharpf <rscharpf at jhsph.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("XDE")
To cite this package in a publication, start R and enter:
citation("XDE")
Documentation
| R Script | XDE Vignette | |
| R Script | XdeParameterClass Vignette | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Bioinformatics, DifferentialExpression, Microarray, Software |
| Version | 2.6.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) |
| License | LGPL-2 |
| Depends | R (>= 2.10.0), Biobase(>= 2.5.5), methods, graphics |
| Imports | Biobase, BiocGenerics, genefilter, graphics, grDevices, gtools, MergeMaid, methods, stats, utils, mvtnorm |
| Suggests | siggenes, genefilter, MASS, RColorBrewer, GeneMeta, RUnit |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | XDE_2.6.0.tar.gz |
| Windows Binary | XDE_2.6.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | XDE_2.6.0.tgz |
| Package Downloads Report | Download Stats |
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