NOISeq
Exploratory analysis and differential expression for RNA-seq data
Bioconductor version: Release (2.12)
Analysis of RNA-seq expression data or other similar kind of data. Exploratory plots to evualuate saturation, count distribution, expression per chromosome, type of detected features, features length, etc. Differential expression between two experimental conditions with no parametric assumptions.
Author: Sonia Tarazona, Pedro Furio-Tari, Alberto Ferrer and Ana Conesa
Maintainer: Sonia Tarazona <starazona at cipf.es>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("NOISeq")
To cite this package in a publication, start R and enter:
citation("NOISeq")
Documentation
| R Script | NOISeq User's Guide | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Bioinformatics, DifferentialExpression, HighThroughputSequencing, RNAseq, Software, Visualization |
| Version | 2.0.0 |
| In Bioconductor since | BioC 2.11 (R-2.16) |
| License | Artistic-2.0 |
| Depends | R (>= 2.13.0), methods, Biobase(>= 2.13.11), splines (>= 3.0.1) |
| Imports | |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | NOISeq_2.0.0.tar.gz |
| Windows Binary | NOISeq_2.0.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | NOISeq_2.0.0.tgz |
| Package Downloads Report | Download Stats |
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