BRAIN

Baffling Recursive Algorithm for Isotope distributioN calculations

Bioconductor version: Release (2.12)

Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.

Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen

Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BRAIN")

To cite this package in a publication, start R and enter:

    citation("BRAIN")

Documentation

PDF R Script BRAIN Usage
PDF   Reference Manual

Details

biocViews Bioinformatics, MassSpectrometry, Proteomics, Software
Version 1.6.6
In Bioconductor since BioC 2.10 (R-2.15)
License GPL-2
Depends R (>= 2.8.1), PolynomF, Biostrings, lattice
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me RforProteomics

Package Downloads

Package Source BRAIN_1.6.6.tar.gz
Windows Binary BRAIN_1.6.6.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BRAIN_1.6.6.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center