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motifRG
A package for discriminative motif discovery, designed for high throughput sequencing dataset
Bioconductor version: Release (2.11)
Tools for discriminative motif discovery using regression methods
Author: Zizhen Yao
Maintainer: Zizhen Yao <yzizhen at fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("motifRG")
To cite this package in a publication, start R and enter:
citation("motifRG")
Documentation
| R Script | motifRG: regression-based discriminative motif discovery | |
| Reference Manual |
Details
| biocViews | MotifDiscovery, Software, Transcription |
| Version | 1.2.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10) |
| Imports | Biostrings, IRanges, seqLogo, parallel, methods, grid,graphics |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | motifRG_1.2.0.tar.gz |
| Windows Binary | motifRG_1.2.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | motifRG_1.2.0.tgz |
| Package Downloads Report | Download Stats |
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