Analyze Illumina's 450k methylation arrays

Bioconductor version: Release (2.11)

Tools for analyzing and visualizing Illumina's 450k array data

Author: Kasper Daniel Hansen, Martin Aryee

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

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PDF R Script Minfi Guide
PDF   Reference Manual
Text   NEWS


biocViews DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel
Version 1.4.0
In Bioconductor since BioC 2.9 (R-2.14)
License Artistic-2.0
Depends methods, BiocGenerics(>= 0.3.2), Biobase(>= 2.17.8), lattice, reshape, GenomicRanges, Biostrings, utils
Imports BiocGenerics, beanplot, RColorBrewer, nor1mix, siggenes, limma, preprocessCore, crlmm, matrixStats, mclust
Suggests IlluminaHumanMethylation450kmanifest(>= 0.2.0), minfiData(>= 0.2.0), RUnit
System Requirements
Depends On Me IlluminaHumanMethylation27kmanifest, IlluminaHumanMethylation450kannotation.ilmn.v1.2, IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kmanifest, minfiData
Imports Me
Suggests Me

Package Downloads

Package Source minfi_1.4.0.tar.gz
Windows Binary minfi_1.4.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) minfi_1.4.0.tgz
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