Linear Model decomposition for Designed Multivariate Experiments

Bioconductor version: Release (2.11)

linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i) Flexible formula type interface, ii) Fast limma based implementation, iii) p and F values over deflacted coefficients and iv) ploting functions for PCA and PLS

Author: Cristobal Fresno and Elmer A. Fernandez

Maintainer: Cristobal Fresno <cristobalfresno at gmail.com>

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PDF R Script lmdme: linear model framework for PCA/PLS analysis of ANOVA decomposition on Designed Multivariate Experiments in R
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biocViews AssayDomains, Bioinformatics, Cancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization
Version 1.0.0
In Bioconductor since BioC 2.11 (R-2.15)
License GPL (>=2)
Depends R (>= 2.14.1), methods, limma, pls
Imports stats
Suggests stemHypoxia
System Requirements
Depends On Me
Imports Me
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Package Source lmdme_1.0.0.tar.gz
Windows Binary lmdme_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) lmdme_1.0.0.tgz
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