cellHTS

Analysis of cell-based screens

Bioconductor version: Release (2.11)

Analysis of cell-based RNA interference screens

Author: Wolfgang Huber <huber at ebi.ac.uk>, Ligia Bras <ligia at ebi.ac.uk>, Michael Boutros <m.boutros at dkfz.de>

Maintainer: Ligia Bras <ligia at ebi.ac.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("cellHTS")

To cite this package in a publication, start R and enter:

    citation("cellHTS")

PDF	R Script	Main vignette: End-to-end analysis of cell-based screens
PDF	R Script	Supplement: multi-channel assays
PDF	R Script	Supplement: two-way assays
PDF		Reference Manual

biocViews	CellBasedAssays, Software, Visualization
Version	1.28.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	Artistic-2.0
Depends	R (>= 2.10), prada(>= 1.9.4), RColorBrewer, Biobase(>= 1.11.12), genefilter(>= 1.11.2)
Imports
Suggests	Category, GO.db, vsn(>= 2.0.35)
System Requirements
URL	http://www.dkfz.de/signaling, http://www.ebi.ac.uk/huber
Depends On Me
Imports Me
Suggests Me	prada

Common Bioconductor workflows include:

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