Bioconductor version: Release (2.11)
This package identifies differential expression in high-throughput 'count' data, such as that derived from next-generation sequencing machines, calculating estimated posterior likelihoods of differential expression (or more complex hypotheses) via empirical Bayesian methods.
Author: Thomas J. Hardcastle
Maintainer: Thomas J. Hardcastle <tjh48 at cam.ac.uk>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("baySeq")
To cite this package in a publication, start R and enter:
citation("baySeq")
R Script | baySeq | |
Reference Manual |
biocViews | Bioinformatics, DifferentialExpression, HighThroughputSequencing, MultipleComparisons, SAGE, Software |
Version | 1.12.0 |
In Bioconductor since | BioC 2.5 (R-2.10) |
License | GPL-3 |
Depends | R (>= 2.3.0), methods |
Imports | |
Suggests | snow, edgeR |
System Requirements | |
URL | |
Depends On Me | Rcade, segmentSeq |
Imports Me | segmentSeq |
Suggests Me | oneChannelGUI |
Package Source | baySeq_1.12.0.tar.gz |
Windows Binary | baySeq_1.12.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) | baySeq_1.12.0.tgz |
Package Downloads Report | Download Stats |
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