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Genominator
Analyze, manage and store genomic data
Bioconductor version: 2.10
Tools for storing, accessing, analyzing and visualizing genomic data.
Author: James Bullard, Kasper Daniel Hansen
Maintainer: James Bullard <bullard at stat.berkeley.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("Genominator")
To cite this package in a publication, start R and enter:
citation("Genominator")
Documentation
| R Script | Plotting with Genominator | |
| R Script | The Genominator User Guide | |
| R Script | Working with the ShortRead Package | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Infrastructure, Software |
| Depends | R (>= 2.10), methods, RSQLite, DBI (>= 0.2-5), BiocGenerics(>= 0.1.0), IRanges, GenomeGraphs |
| Imports | graphics, stats, utils |
| Suggests | biomaRt, ShortRead, yeastRNASeq |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oneChannelGUI |
| Version | 1.10.0 |
| Since | Bioconductor 2.5 (R-2.10) |
Package Downloads
| Package Source | Genominator_1.10.0.tar.gz |
| Windows Binary | Genominator_1.10.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | Genominator_1.10.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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