spkTools

Methods for Spike-in Arrays

Bioconductor version: 2.8

The package contains functions that can be used to compare expression measures on different array platforms.

Author: Matthew N McCall <mmccall at jhsph.edu>, Rafael A Irizarry <rafa at jhu.edu>

Maintainer: Matthew N McCall <mmccall at jhsph.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("spkTools")

To cite this package in a publication, start R and enter:

    citation("spkTools")

Documentation

PDF R Script spkTools: Spike-in Data Analysis and Visualization
PDF   Reference Manual

Details

biocViews Software, AssayTechnologies, Microarray
Depends R (>= 2.7.0), Biobase(>= 2.5.5)
Imports Biobase(>= 2.5.5), graphics, grDevices, gtools, methods, RColorBrewer, stats, utils
Suggests xtable
System Requirements
License GPL (>= 2)
URL http://bioconductor.org
Depends On Me
Imports Me
Suggests Me
Version 1.8.0
Since Bioconductor 2.4 (R-2.9)

Package Downloads

Package Source spkTools_1.8.0.tar.gz
Windows Binary spkTools_1.8.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary spkTools_1.8.0.tgz
Package Downloads Report Download Stats

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