rsbml

R support for SBML, using libsbml

Bioconductor version: 2.8

Links R to libsbml for SBML parsing, validating output, provides an S4 SBML DOM, converts SBML to R graph objects. Optionally links to the SBML ODE Solver Library (SOSLib) for simulating models.

Author: Michael Lawrence <michafla at gene.com>

Maintainer: Michael Lawrence <michafla at gene.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("rsbml")

To cite this package in a publication, start R and enter:

    citation("rsbml")

Documentation

PDF R Script Quick start for rsbml
PDF   Reference Manual

Details

biocViews GraphsAndNetworks
Depends R (>= 2.6.0), methods, utils
Imports graph, utils
Suggests
System Requirements libsbml (>=3.0.3)
License Artistic-2.0
URL http://www.sbml.org
Depends On Me
Imports Me
Suggests Me
Version 2.10.0
Since Bioconductor 2.1 (R-2.6)

Package Downloads

Package Source rsbml_2.10.0.tar.gz
Windows Binary rsbml_2.10.0.zip (32-bit only)
MacOS 10.5 (Leopard) binary rsbml_2.10.0.tgz
Package Downloads Report Download Stats

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