pdmclass

Classification of Microarray Samples using Penalized Discriminant Methods

Bioconductor version: 2.8

This package can be used to classify microarray data using one of three penalized regression methods; partial least squares, principal components regression, or ridge regression.

Author: James W. MacDonald, Debashis Ghosh, based in part on pls code of Mike Denham

Maintainer: James W. MacDonald <jmacdon at med.umich.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("pdmclass")

To cite this package in a publication, start R and enter:

    citation("pdmclass")

Documentation

PDF R Script pdmclass Overview
PDF   Reference Manual

Details

biocViews Classification
Depends Biobase(>= 1.4.22), R (>= 1.9.0), fibroEset, mda
Imports
Suggests
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me oneChannelGUI
Version 1.24.0
Since Bioconductor 1.7 (R-2.2)

Package Downloads

Package Source pdmclass_1.24.0.tar.gz
Windows Binary pdmclass_1.24.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary pdmclass_1.24.0.tgz
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