netresponse

NetResponse: functional network analysis

Bioconductor version: 2.8

Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.

Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen

Maintainer: Leo Lahti <leo.lahti at iki.fi>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("netresponse")

To cite this package in a publication, start R and enter:

    citation("netresponse")

Documentation

PDF R Script netresponse
PDF   Reference Manual

Details

biocViews CellBiology, Clustering, GeneExpression, Genetics, GraphsAndNetworks, DifferentialExpression, Microarray, Transcription
Depends methods, igraph, graph, minet
Imports
Suggests
System Requirements
License GPL (>=2)
URL http://netpro.r-forge.r-project.org/
Depends On Me
Imports Me
Suggests Me
Version 1.4.0
Since Bioconductor 2.7 (R-2.12)

Package Downloads

Package Source netresponse_1.4.0.tar.gz
Windows Binary netresponse_1.4.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary netresponse_1.4.0.tgz
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