frma

Frozen RMA and Barcode

Bioconductor version: 2.8

Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mmccall at jhsph.edu>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mmccall at jhsph.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("frma")

To cite this package in a publication, start R and enter:

    citation("frma")

Documentation

PDF R Script frma: Preprocessing for single arrays and array batches
PDF   Reference Manual

Details

biocViews Software, Microarray, Preprocessing
Depends R (>= 2.10.0), Biobase(>= 2.6.0)
Imports Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils
Suggests hgu133afrmavecs, hgu133abarcodevecs, frmaExampleData
System Requirements
License GPL (>= 2)
URL http://bioconductor.org
Depends On Me
Imports Me
Suggests Me frmaTools
Version 1.4.0
Since Bioconductor 2.6 (R-2.11)

Package Downloads

Package Source frma_1.4.0.tar.gz
Windows Binary frma_1.4.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary frma_1.4.0.tgz
Package Downloads Report Download Stats

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