flowClust

Clustering for Flow Cytometry

Bioconductor version: 2.8

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>

Maintainer: Raphael Gottardo <raph at stat.ubc.ca>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("flowClust")

To cite this package in a publication, start R and enter:

    citation("flowClust")

Documentation

PDF R Script flowClust package
PDF   Reference Manual

Details

biocViews Clustering, Bioinformatics, Visualization, FlowCytometry
Depends R(>= 2.5.0), methods, mnormt, ellipse, Biobase, flowCore(>= 1.11.23)
Imports
Suggests snowfall
System Requirements
License Artistic-2.0
URL
Depends On Me flowMerge, flowTrans
Imports Me flowMerge, flowPhyto, flowTrans
Suggests Me
Version 2.10.0
Since Bioconductor 2.2 (R-2.7)

Package Downloads

Package Source flowClust_2.10.0.tar.gz
Windows Binary flowClust_2.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary flowClust_2.10.0.tgz
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