dualKS

Dual KS Discriminant Analysis and Classification

Bioconductor version: 2.8

This package implements a Kolmogorov Smirnov rank-sum based algorithm for training (i.e. discriminant analysis--identification of genes that discriminate between classes) and classification of gene expression data sets. One of the chief strengths of this approach is that it is amenable to the "multiclass" problem. That is, it can discriminate between more than 2 classes.

Author: Eric J. Kort, Yarong Yang

Maintainer: Eric J. Kort <eric.kort at vai.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("dualKS")

To cite this package in a publication, start R and enter:

    citation("dualKS")

Documentation

PDF R Script dualKS.pdf
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics
Depends R (>= 2.6.0), Biobase(>= 1.15.0), affy, methods
Imports
Suggests
System Requirements
License LGPL (>= 2.0)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.12.0
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source dualKS_1.12.0.tar.gz
Windows Binary dualKS_1.12.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary dualKS_1.12.0.tgz
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