codelink

Manipulation of Codelink Bioarrays data.

Bioconductor version: 2.8

This packages allow reading into R of Codelink bioarray data exported as text from the Codelink software. Also includes some functions to ease the manipulation and pre-processing of data, such in background correction and normalization.

Author: Diego Diez <diez at kuicr.kyoto-u.ac.jp>

Maintainer: Diego Diez <diez at kuicr.kyoto-u.ac.jp>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("codelink")

To cite this package in a publication, start R and enter:

    citation("codelink")

Documentation

PDF R Script codelink
PDF R Script CodelinkSet
PDF   Reference Manual

Details

biocViews Microarray, OneChannel, DataImport, Preprocessing
Depends methods, Biobase(>= 2.5.5), limma
Imports annotate
Suggests genefilter
System Requirements
License GPL-2
URL http://www.kuicr.kyoto-u.ac.jp/~diez
Depends On Me
Imports Me
Suggests Me AgiMicroRna, MAQCsubset
Version 1.20.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source codelink_1.20.0.tar.gz
Windows Binary codelink_1.20.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary codelink_1.20.0.tgz
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