betr

Identify differentially expressed genes in microarray time-course data

Bioconductor version: 2.8

The betr package implements the BETR (Bayesian Estimation of Temporal Regulation) algorithm to identify differentially expressed genes in microarray time-course data.

Author: Martin Aryee

Maintainer: Martin Aryee <aryee at jhu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("betr")

To cite this package in a publication, start R and enter:

    citation("betr")

Documentation

PDF R Script BETR Vignette
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics, DifferentialExpression, TimeCourse
Depends R(>= 2.6.0)
Imports Biobase(>= 2.5.5), limma, mvtnorm, methods, stats
Suggests Biobase
System Requirements
License LGPL
URL
Depends On Me
Imports Me
Suggests Me
Version 1.8.0
Since Bioconductor 2.4 (R-2.9)

Package Downloads

Package Source betr_1.8.0.tar.gz
Windows Binary betr_1.8.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary betr_1.8.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center