To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")

In most cases, you don't need to download the package archive at all.

RTCA

   

This package is for version 2.8 of Bioconductor; for the stable, up-to-date release version, see RTCA.

Open-source toolkit to analyse data from xCELLigence System (RTCA) by Roche

Bioconductor version: 2.8

Import, analyze and visualize data harvested from Roche(R) Xcelligence RTCA systems. The package imports the rich information in real-time cell electrical impedance data into computational and statistical environment R/Bioconductor. As an alternative to commercial software provided by Roche, the RTCA package provides more transformation (normalization) strategies and various visualization tools.

Author: Jitao David Zhang, with input from Ulrich Tschulena, Özgür Sahin and Stefan Wiemann

Maintainer: Jitao David Zhang <j.zhang at dkfz.de>

Citation (from within R, enter citation("RTCA")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RTCA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTCA")

 

PDF aboutRTCA.pdf
PDF RTCAtransformation.pdf
PDF   Reference Manual

Details

biocViews CellBasedAssays, Infrastructure, Software, TimeCourse, Visualization
Version 1.4.0
In Bioconductor since BioC 2.5 (R-2.10) (6.5 years)
License LGPL-3
Depends methods, stats, graphics, Biobase, RColorBrewer, gtools
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://code.google.com/p/xcelligence/ http://www.xcelligence.roche.com/ http://www.nextbiomotif.com/Home/scientific-programming
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source RTCA_1.4.0.tar.gz
Windows Binary RTCA_1.4.0.zip
Mac OS X 10.6 (Snow Leopard)
Mac OS X 10.9 (Mavericks)
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/RTCA/tree/release-2.8
Package Short Url http://bioconductor.org/packages/RTCA/
Package Downloads Report Download Stats

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