MSnbase

MSnbase: Base Functions and Classes for MS-based Proteomics

Bioconductor version: 2.8

Basic plotting, data manipulation and processing of MS-based Proteomics data

Author: Laurent Gatto

Maintainer: Laurent Gatto <lg390 at cam.ac.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("MSnbase")

To cite this package in a publication, start R and enter:

    citation("MSnbase")

Documentation

PDF R Script Base Functions and Classes for MS-based Proteomics
PDF R Script MSnbase development
PDF   Reference Manual

Details

biocViews Infrastructure, Bioinformatics, Proteomics, MassSpectrometry
Depends Biobase(>= 2.11.0), methods, ggplot2
Imports plyr, graphics, xcms, IRanges
Suggests testthat, zoo, vsn, pgfSweave
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.7
Since Bioconductor 2.8 (R-2.13)

Package Downloads

Package Source MSnbase_1.0.7.tar.gz
Windows Binary MSnbase_1.0.7.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary MSnbase_1.0.7.tgz
Package Downloads Report Download Stats

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