LMGene

LMGene Software for Data Transformation and Identification of Differentially Expressed Genes in Gene Expression Arrays

Bioconductor version: 2.8

LMGene package for analysis of microarray data using a linear model and glog data transformation

Author: David Rocke, Geun Cheol Lee, John Tillinghast, Blythe Durbin-Johnson, and Shiquan Wu

Maintainer: Blythe Durbin-Johnson <bpdurbin at ucdavis.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("LMGene")

To cite this package in a publication, start R and enter:

    citation("LMGene")

Documentation

PDF R Script LMGene User's Guide
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics, DifferentialExpression, Preprocessing
Depends R (>= 2.10.0), Biobase(>= 2.5.5), multtest, survival, affy
Imports
Suggests affydata
System Requirements
License LGPL
URL http://dmrocke.ucdavis.edu/software.html
Depends On Me
Imports Me
Suggests Me
Version 2.8.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source LMGene_2.8.0.tar.gz
Windows Binary LMGene_2.8.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary LMGene_2.8.0.tgz
Package Downloads Report Download Stats

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