HELP

Tools for HELP data analysis

Bioconductor version: 2.8

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications

Author: Reid F. Thompson <rthompso at aecom.yu.edu>, John M. Greally <jgreally at aecom.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <rthompso at aecom.yu.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("HELP")

To cite this package in a publication, start R and enter:

    citation("HELP")

Documentation

PDF R Script 1. Primer
PDF   Reference Manual

Details

biocViews CpGIsland, DNAMethylation, Microarray, TwoChannel, DataImport, QualityControl, Preprocessing, Visualization
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.10.0
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source HELP_1.10.0.tar.gz
Windows Binary HELP_1.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary HELP_1.10.0.tgz
Package Downloads Report Download Stats

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Fred Hutchinson Cancer Research Center