BioSeqClass

Classification for Biological Sequences

Bioconductor version: 2.8

Extracting Features from Biological Sequences and Building Classification Model

Author: Li Hong sysptm@gmail.com

Maintainer: Li Hong <sysptm at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BioSeqClass")

To cite this package in a publication, start R and enter:

    citation("BioSeqClass")

Documentation

PDF cvFFSClassify0005.pdf
PDF FeatureSets16.pdf
PDF R Script Using the BioSeqClass Package
PDF workflow.pdf
PDF   Reference Manual

Details

biocViews Classification
Depends
Imports Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
Suggests
System Requirements
License LGPL (>= 2.0)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.10.0
Since Bioconductor 2.5 (R-2.10)

Package Downloads

Package Source BioSeqClass_1.10.0.tar.gz
Windows Binary BioSeqClass_1.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary BioSeqClass_1.10.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center