ArrayExpress

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: 2.8

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Author: Audrey Kauffmann

Maintainer: Audrey Kauffmann <akauffmann.bioinfo at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ArrayExpress")

To cite this package in a publication, start R and enter:

    citation("ArrayExpress")

Documentation

PDF R Script ArrayExpress: Import and convert ArrayExpress data sets into R object
PDF   Reference Manual

Details

biocViews Microarray, DataImport, OneChannel, TwoChannel
Depends R (>= 2.9.0), Biobase(>= 2.4.0)
Imports XML, affy, limma
Suggests
System Requirements
License Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.12.1
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source ArrayExpress_1.12.1.tar.gz
Windows Binary ArrayExpress_1.12.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary ArrayExpress_1.12.1.tgz
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