Bioconductor Task View: Technology

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Package Maintainer Title
aCGH Jane Fridlyand Classes and functions for Array Comparative Genomic Hybridization data.
apComplex Denise Scholtens Estimate protein complex membership using AP-MS protein data
Biostrings H. Pages String objects representing biological sequences, and matching algorithms
BSgenome H. Pages Infrastructure for Biostrings-based genome data packages
cellHTS Ligia Bras Analysis of cell-based screens
cellHTS2 Gregoire Pau Analysis of cell-based screens - revised version of cellHTS
fbat Weiliang Qiu Family Based Association Tests for genetic data.
flowCore Nolwenn Le Meur flowCore: Basic structures for flow cytometry data
flowQ N. Le Meur Qualitiy control for flow cytometry
flowUtils Florian Hahne Utilities for flow cytometry
flowViz Florian Hahne Visualization for flow cytometry
GeneR Y. d'Aubenton-Carafa R for genes and sequences analysis
GeneRfold Antoine Lucas R for genes and sequences, using viennaRNA package (fold)
GeneticsBase Gregory Warnes Classes and functions for handling genetic data
GeneticsDesign Gregory Warnes Functions for designing genetics studies
GeneticsPed Gregor Gorjanc Pedigree and genetic relationship functions
GEOquery Sean Davis Get data from NCBI Gene Expression Omnibus (GEO)
GGBase Vince Carey infrastructure for genetics of gene expression (c) 2008 VJ Carey
GGtools Vince Carey software and data for genetical genomics (c) 2006 VJ Carey
MassSpecWavelet Pan Du Mass spectrum processing by wavelet-based algorithms
PCpheno Nolwenn Le Meur Phenotypes and cellular organizational units
plgem Mattia Pelizzola Power Law Global Error Model
ppiStats Tony Chiang Protein-Protein Interaction Statistical Package
prada Florian Hahne Data analysis for cell-based functional assays
PROcess Xiaochun Li Ciphergen SELDI-TOF Processing
Rdisop Steffen Neumann Decomposition of Isotopic Patterns
rflowcyt N. LeMeur Statistical tools and data structures for analytic flow cytometry
Rintact Tony Chiang Interface to EBI Intact protein interaction data base
RSNPper VJ Carey interface to for SNP-related data
Ruuid Biocore Team c/o BioC user list Ruuid: Provides Universally Unique ID values
sagenhaft Tim Beissbarth Collection of functions for reading and comparing SAGE libraries
ScISI Tony Chiang In Silico Interactome
simulatorAPMS Tony Chiang Computationally simulates the AP-MS technology.
SLGI Nolwenn Le Meur Synthetic Lethal Genetic Interaction
xcms Colin A. Smith LC/MS and GC/MS Data Analysis