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resources for genetics of gene expression based on Cheung et al 2010

Bioconductor version: 2.13

Data resources related to the PLoS Biology paper Polymorphic Cis- and Trans-Regulation of Human Gene Expression, including small-footprint smlSet support for 147 hgfocus arrays and corresponding HapMap genotypes at 1.3 million SNP; 0.0.22+ includes cheung_eset... from Leek et al RECOUNT myrna output

Author: Vince Carey <stvjc at>

Maintainer: Vince Carey <stvjc at>

Citation (from within R, enter citation("cheung2010")):


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PDF R Script cheungTrans: checking trans eQTL with hgfocus arrays
PDF   Reference Manual


biocViews ExperimentData, GeneticVariability, RNAseqData
Version 0.0.29
License Artistic 2.0
Depends R (>= 2.13.0), Biobase, GGtools, GenomicRanges, hgfocus.db
Imports AnnotationDbi
Suggests SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109
System Requirements
Depends On Me ggtut
Imports Me
Suggests Me

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