To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("affydata")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.13
Example datasets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.
Author: Laurent Gautier <laurent at cbs.dtu.dk>
Maintainer: Harris Jaffee <hj at jhu.edu>
Citation (from within R,
enter citation("affydata")):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("affydata")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("affydata")
| R Script | affydata primer | |
| Reference Manual |
| biocViews | ExperimentData, Microarray, OneChannel |
| Version | 1.11.20 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier |
| License | GPL (>= 2) |
| Depends | R (>= 2.4.0), affy(>= 1.23.4) |
| Imports | methods |
| Suggests | hgu95av2cdf, hgu133acdf |
| System Requirements | |
| URL | |
| Depends On Me | affyContam, RPA |
| Imports Me | |
| Suggests Me | affy, affycoretools, affyPara, affypdnn, affyPLM, affyQCReport, arrayMvout, ArrayTools, bgx, Biostrings, farms, gcrma, LMGene, puma, pvac, RefPlus, sscore, TurboNorm, virtualArray, vsn, yaqcaffy |
Follow Installation instructions to use this package in your R session.
| Package Source | affydata_1.11.20.tar.gz |
| Windows Binary | affydata_1.11.20.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | affydata_1.11.20.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
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